poster and Demo Session

27 Sep 2018
17:15 - 18:15

poster and Demo Session

Poster Presentations

Towards truly automatic bird audio detection: an international challenge
Dan Stowell

Does the Climate Change affect the Net Water Budget of the Terrestrial Biosphere?
Abdulla Sakalli and Mehmet Ugur Gucel

Assessing Ecosystem Change using Soundscape Analysis
Diana C. Duque-Montoya, Claudia Isaza, and Juan M. Daza

MatlabHTK: a simple interface for bioacoustic analyses using hidden Markov models
Louis Ranjard

MAAD, a rational unsupervised method to estimate diversity in ecoacoustic recordings
Juan Sebastian Ulloa, Thierry Aubin, Sylvain Haupert, Chloé Huetz, Diego Llusia, Charles Bouveyron and Jerome Sueur

Underwater acoustic habitats: towards a toolkit to assess acoustic habitat quality
Irene Roca and Ilse Van Opzeeland

Trends and biases in ecology concepts during the last century
Shengqi Dai, Bin Zhao and Hong Li

Focus on geophony: what weather sounds can tell
Roberta Righini and Gianni Pavan

Using robustness as a tool for the assessment of ecosystem health – a case study from Hooghly Matla estuary, India
Nabyendu Rakshit and Santanu Ray

DeltaMP: A flexible, reproducible and resource efficient pipeline for the analysis of high-throughput amplicon sequencing data of eukaryotes
Christina Weißbecker, Anna Heintz-Buschart, Tesfaye Wubet, Franҫois Buscot and Guillaume Lentendu

Reverse Wavelet Interference Algorithm for Detection of Avian Species and Characterization of Biodiversity
Sajeev C Rajan, Athira K, and Jaishanker R

Using multiagent systems to approximate mathematical models to biological behavior
Theis Strøm-Hansen, Jakob Christensen-Dalsgaard, and John Hallam

Automatic Bird Sound Detection: Logistic Regression Based Acoustic Occupancy Model
Yi-Chin Tseng, Bianca Eskelson, and Kathy Martin

A software detector for monitoring endangered common spadefoot toad populations
Guillaume Dutilleux and Charlotte Curé

Query Processing in Ontology Based Data Access
Majid Askar, Alsayed Algergawy, Taysir Soliman, Birgitta König-Ries and Adel Sewisy

Satellite-based monitoring of invasive woody species in central Chile
Anne Clasen, Michael Foerster, Tobias Schmidt, Fabian E. Fassnacht and Birgit Kleinschmit

Ecological observations and conservation strategies of a threatened – endemic plant (Wendlandia angustifolia Wight ex Hook.f.) in the forests of Western Ghats, India
Muthumperumal Chellam and Balasubramanian Paramasivam

Biodiversity implications of international trade: comparison of species threatened from alternative electricity production with natural gas or concentrated solar power
Irene Rodríguez-Serrano, Natalia Caldés and Yolanda Lechón

Automating the integration and accessibility of diverse geospatial data cubes
Heather Savoy and Debra Peters

Improved environmental monitoring of air and water quality by combination of high throughput image cytometry and deep learning
Susanne Dunker, David Boho, Jana Wäldchen and Patrick Mäder

Definition of the concept of Green Infrastructure and its implementation
Arthur Sanguet, Erica Honeck, Anthony Lehmann and Nicolas Wyler

Analyzing the effect of armed conflict, agriculture and fire on the movement and migratory behaviour of White eared kob and Roan antelope in the Boma-Gambella landscape of Ethiopia and South Sudan.
Kasahun Abera and Afework Bekele

Towards FAIR data in Biodiversity Exploratories project
Andreas Ostrowski, Eleonora Petzold, and Cornelia Fürstenau

Towards Automatic Identification of Elephants in the Wild
Matthias Körschens, Björn Barz and Joachim Denzler

Continuous ecoacoustic long-term monitoring of a pristine coral reef: when data-intensive ecology responds directly to ecosystem management objectives
Simon Elise, Marion Couëdel and Henrich Bruggemann

Biofid, a platform to enhance accessibility of biodiversity data
Claus Weiland, Christine Driller, Markus Koch, Marco Schmidt, Giuseppe Abrami, Sajawel Ahmed, Alexander Mehler, Adrian Pachzelt, Gerwin Kasperek, Angela Hausinger and Thomas Hörnschemeyer

Drivers of diurnal and seasonal soundscape patterns in temperate grasslands
Sandra Mueller and Michael Scherer-Lorenzen

Traditional vs. modern Citizen Sciences in Phenology – an example of DWD, ZAMG and
Saskia Pietzsch, Thomas Hübner and Gaby Schulemann-Maier

Galaxy-E, towards a complete open source workflow oriented e-infrastructure in Ecology?
Yvan Le Bras, Valentin Chambon, Alan Amosse, Elisa Michon, Clara Urfer, Julien Sananikone, Elise Brax, Marianne Linares, Marie Delannoy, Gregoire Lois and Romain Julliard

A Data Mining Approach for Species Co-occurrence Prediction
Dina Sharafeldeen, Alsayed Algergawy and Birgitta König-Ries

Using multi-temporal RapidEye remote sensing data to map semi-natural grassland communities
Christoph Raab, Hans Georg Stroh, Bettina Tonn, Marcus Meißner, Nina Rohwer, Niko Balkenhol and Johannes Isselstein

RefYolo: Refining YOLO for detecting objects from digitized herbarium specimen images
Abdelaziz Triki, Bassem Bouaziz, and Jitendra Gaikwad

Assessing biodiversity from space – An example from the diverse tropical mountain rainforests
Christine Isabeau Bernarde Wallis, Nina Farwig, Roland Brandl and Jörg Bendix

Interactive Plant Identification in Flora Key
Oliver Bley, Jana Wäldchen, and Patrick Mäder

PylotWhale a python package for automatically annotating bioacoustic recordings
Maria Florencia Noriega Romero Vargas, Heike Vester, and Marc Timme

Effects of environmental variables and zooplankton on Picocyanobacteria dominance in two tropical mesotrophic reservoirs
Maria Isabel Rocha, Friedrich Recknagel, Vera L. Huszar, Betina Kozlowsky-Suzuki, Hongqing Cao, Fernando Starling, Ewerton Oliveira and Christina Castelo Branco

Connecting remote sensing and in situ measurements in river-lake chain research
Christine Kiel, Stella A Berger, Sabine Wollrab, Jens C Nejstgaard, Hans-Peter Grossart, Gabriel Singer, Franz Hölker, Andreas Jechow, Jürgen Fischer, Thomas Ruhtz, Peter Gege, Torsten Sachs, Matthias Labrenz, Gunnar Lischeid, Rüdiger Röttgers and Thomas Schneider

Spatial localization of vocalizations of Spotted Towhee (Pipilo maculatus) in playback experiments using robot audition techniques
Shinji Sumitani, Reiji Suzuki, Shiho Matsubayashi, Takaya Arita, Kazuhiro Nakadai and Hiroshi G. Okuno

An overview of the Saint-Pierre-and-Miquelon marine soundscape
Paul Nguyen Hong Duc, Dorian Cazau, Olivier Adam, Odile Gérard and Paul White

RSonde Tool: A project for developing a reservoir monitoring tool coupling remote sensing and high frequency in situ data.
Carmen Cillero Castro, Jordi Delgado Martin, Ramón Alberto Díaz Varela, José Antonio Domínguez, Boris Alejandro Hinojo, Jose Luis Cereijo, David García, Federico Cheda and Marco Rubinos

Analysis of almost a hundred long distance migration paths of Italian and Swiss barn swallows (Hirundo rustica) reconstructed on the basis of light level geolocators
Mattia Pancerasa, Roberto Ambrosini, David W. Winkler, Eldar Rakhimberdiev, Diego Rubolini, Felix Liechti, Nicola Saino and Renato Casagrandi

Multimodal Plant Species Identification
Hans Christian Wittich, David Boho, and Patrick Mäder

Content-based Image Retrieval for Biodiversity: A Comparative Study
Nora Youssef and Alsayed Algergawy

Nocurnal bird migration on the Baltic Sea coast
Hanna Pamuła and Maciej Kłaczyński

Plant Diseases prediction using Deep Learning
Jihen Amara, Bassem Bouaziz and Alsayed Algergawy

Specimen-GT tool: Ground Truth Annotation tool for herbarium Specimen images
Bassem Bouaziz, Rochdi Benali, Abdelaziz Triki and Jitendra Gaikwad

Developping semantic interoperability in ecology and ecosystem studies: the AnaEE infrastructure framework
Christian Pichot

Improving the Quality of Biodiversity Data Through Semantic Web Standards
Marcos Zarate, Mirtha Lewis, Pablo Fillottrani and Claudio Delrieux

ADOnIS – An ontology-based information system providing seamless integration of structured and unstructured data
Alsayed Algergawy, Friederike Klan, Erik Faessler, Birgitta König-Ries, Udo Hahn, Hamdi Hamed and Bernd Kampe

DiSSCo – The Distributed System of Scientific Collections
Niels Raes, Wouter Addink, Dimitris Koureas, and the DiSSCo consortium

Extracting information on bat activities from long-term ultrasonic recordings through sound separation
Chia-Yun Lee, Tzu-Hao Lin and Mao-Ning Tuanmu

Computer Demonstrations

BirdNET: Real-time Bird Sound Identification using Convolutional Neural Networks
Stefan Kahl, Thomas Wilhelm-Stein, Holger Klinck, Danny Kowerko and Maximilian Eibl

Unfolding existing Data Publication Practice in Research Workflows in the Life Sciences
Felicitas Löffler, Tina Astor, and Claudia Müller-Birn

Galaxy-E, open source workflow oriented platform for Ecological data access and analysis
Valentin Amosse, Alan Amosse, Elisa Michon, Clara Urfer and Yvan Le Bras

Demonstration of the R package nbaR: Automated access to the Netherlands Biodiversity Data Services
Hannes Hettling, Maarten Schermer, Rutger Vos and Daphne Duin

Showcase: Towards an EBV Data Portal
Christian Langer, Nestor Fernandez, Christian Beilschmidt, Johannes Drönner, Michael Mattig and Bernhard Seeger

TraitEx: tool for measuring morphological functional traits from digitized herbarium specimens
Jitendra Gaikwad, Abdelaziz Triki, Bassem Bouaziz, Hamdi Hamed and Jörn Hentschel

BioOntoVis: Ontologies Visualization Tool for biodiversity
Nassira Achich, Bassem Bouaziz, Alsayed Algergawy and Birgitta Koenig-Ries

Research data management in action – demonstrating the full range of features of the BEXIS 2 platform
Roman Gerlach, Andreas Ostrowski, Jitendra Gaikwad and Alsayed Algergawy